Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944624.1_cds_XP_016487386.1_78125
CDS Infomation

[gene=LOC107807494] [db_xref=GeneID:107807494] [protein=pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like] [protein_id=XP_016487386.1] [location=1743..3071] [gbkey=CDS]
Sequence

ATGGGTTCCCAATCTGCTGCCCTGCAAGTTAAAATCTTATCCACAAATTTCATAACACCA
TCCTCACCAACCCCAAATCACTTACAAAATTACAAGTTATCTTTCTTTGATCAAATAGCT
GAAGATGTTCACTTGCCTCTTGTTCTTTTCTATCCACCAAATGATAAAAACTCAACTACG
GATGAACAACTCGAAGAATCCCTATCTAGAGTATTAATCCATGTTTACCCGATAGCTGGT
AGATTTACAGAGGATTTTTGCTCCATAAATTGCCTTGATCAAGGGGTTAAATTTGTAAGG
GCAAATGTCAATAGTAAGCTCGATGATTTTCTTGAGCAAGCACACAAGGATGTTAATGCC
GCACTACTTTGTTGGCCTCACGATACTTGGACTGTTGATGAAGGTAATCTGGCTATTACA
CCTCTCGTTATCGTCCAAGTAACAAGATTTGAATGTGGTGGCATAGCTCTGTCAATGAGC
CACGCCCACATTGCAATGGACGGATTCTCGAGTCTCTCTTTTTTGTACGAGTGGTCCAAA
GTGTGTAGACTCGGAATCCCCACAAAAGAAATCAATTTCTTGAGCTTTAATTTGGGTGAA
ATTTTCCCTTCAAGGGATTTATCTAAGCTTTTACTGCCTCGTATTCCGGGAGAGAAACGT
GCAGAAAGCAAACTGGTCGCTAAGAGGTTATATATTGATGAATCTGCTATATCAAAGCTA
AGAGATGAAATGACAGGTTTGAGTTTCAAACCTACGAGAGTCGAGATGATTACAGCAGTT
TTATGGAGGGCTTTGATCCGTGCTTCGGAAGCGAAAAACAGAAATATGAGACGTTCTTTA
ATGGGTGTTCCAGTCAACTTGCGTAGTAAGATCTCTTTGCCTCAAATTGAAAAGTGTTTT
GGTAATCTTGTAGTTGATTCTCCAGTAAAATTTGTACCGGGGGAGACCAAGATGGAGCTG
CATAACATGGTGGCATTGATAAGGGATACAGTGCAGAAAACTATTGAGTATTGCAACAAG
GAATCACCAGATGAGATAGTCTCAGCGGTTGCTGATTTATACAATGGAAGTTTTCAGGCA
AATGACTGGGGTGCCAGTCATGAAGTTGACGCGTTTACGTGTTCAAGTTTGTGCAGGTTT
CCTATACTAGGAGCTGATTTTGGTTGGGGGAAACCTTGCTTGATGCATTTTGGATCCAGG
CATAATCAAACTTGTTGGTTGTATGATGCAGAGTGTGGCAATGGTGTCTGTGTGCAGGTG
GATATCAAGGAAAGTTACATGCGCTTCTTTGAATGCGACCAAGATATCAAGGCTTATTTT
AATTGGTGA

Peptide Sequence

PEP ID

XP_016487386.1
PEP Infomation

PREDICTED: pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like [Nicotiana tabacum]
Sequence

MGSQSAALQVKILSTNFITPSSPTPNHLQNYKLSFFDQIAEDVHLPLVLFYPPNDKNSTT
DEQLEESLSRVLIHVYPIAGRFTEDFCSINCLDQGVKFVRANVNSKLDDFLEQAHKDVNA
ALLCWPHDTWTVDEGNLAITPLVIVQVTRFECGGIALSMSHAHIAMDGFSSLSFLYEWSK
VCRLGIPTKEINFLSFNLGEIFPSRDLSKLLLPRIPGEKRAESKLVAKRLYIDESAISKL
RDEMTGLSFKPTRVEMITAVLWRALIRASEAKNRNMRRSLMGVPVNLRSKISLPQIEKCF
GNLVVDSPVKFVPGETKMELHNMVALIRDTVQKTIEYCNKESPDEIVSAVADLYNGSFQA
NDWGASHEVDAFTCSSLCRFPILGADFGWGKPCLMHFGSRHNQTCWLYDAECGNGVCVQV
DIKESYMRFFECDQDIKAYFNW

Transcript Sequence

Gene sequence data has not been registered.